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Catlas
Introduction
Use
Installation and setup
Making a config
Running Catlas
Understanding Outputs
Contributing
Advanced Use
docstrings
adslab_predictions
cache_utils
config_validation
dask_kube_utils
dask_utils
data_processing_utils
enumerate_slabs_adslabs
filter_utils
filters
nuclearity
parity_utils
prediction_steps
sankey_utils
repository
open issue
Index
A
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B
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C
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D
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E
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F
|
G
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H
|
K
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L
|
M
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N
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P
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R
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S
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T
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U
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V
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W
A
add_adslab_info() (catlas.sankey.sankey_utils.Sankey method)
add_slab_info() (catlas.sankey.sankey_utils.Sankey method)
adsorbate_filter() (in module catlas.filters)
B
bag_split_individual_partitions() (in module catlas.dask_utils)
BatchOCPPredictor (class in catlas.adslab_predictions)
,
[1]
better_build_func_identifier() (in module catlas.cache_utils)
bulk_filter() (in module catlas.filters)
C
catlas.adslab_predictions
module
catlas.cache_utils
module
catlas.config_validation
module
catlas.dask_kube_utils
module
catlas.dask_utils
module
catlas.enumerate_slabs_adslabs
module
catlas.filter_utils
module
catlas.filters
module
catlas.nuclearity
module
catlas.parity.parity_utils
module
catlas.prediction_steps
module
check_cache() (in module catlas.cache_utils)
close() (catlas.cache_utils.SqliteSingleThreadDict method)
convert_adslabs_to_graphs() (in module catlas.enumerate_slabs_adslabs)
count_steps() (in module catlas.adslab_predictions)
CustomAdsorbate (class in catlas.enumerate_slabs_adslabs)
CustomBulk (class in catlas.enumerate_slabs_adslabs)
D
direct_prediction() (catlas.adslab_predictions.BatchOCPPredictor method)
,
[1]
E
energy_prediction() (in module catlas.adslab_predictions)
enumerate_adslabs() (in module catlas.enumerate_slabs_adslabs)
enumerate_adslabs_wrapper() (in module catlas.prediction_steps)
enumerate_slabs() (in module catlas.enumerate_slabs_adslabs)
enumerate_surfaces_and_filter() (in module catlas.prediction_steps)
evaluate_infiniteness() (in module catlas.nuclearity)
F
filter_best_facet_by_surface_property() (in module catlas.filter_utils)
filter_by_surface_property() (in module catlas.filter_utils)
filter_columns_by_type() (in module catlas.filter_utils)
finish_sankey_diagram() (in module catlas.prediction_steps)
G
generate_outputs() (in module catlas.prediction_steps)
get_bond_length() (in module catlas.filter_utils)
get_broken_bonds() (in module catlas.filter_utils)
get_bulk_cn() (in module catlas.filter_utils)
get_cached_func_location() (in module catlas.cache_utils)
get_center_of_mass() (in module catlas.filter_utils)
get_connectivity_matrix() (in module catlas.nuclearity)
get_decomposition_bools_from_list() (in module catlas.filter_utils)
get_decomposition_bools_from_range() (in module catlas.filter_utils)
get_elements_in_groups() (in module catlas.filter_utils)
get_first_type() (in module catlas.filter_utils)
get_general_plot() (in module catlas.parity.parity_utils)
get_model_id() (in module catlas.parity.parity_utils)
get_namespace() (in module catlas.dask_kube_utils)
get_nuclearity() (in module catlas.nuclearity)
get_nuclearity_neighbor_counts() (in module catlas.nuclearity)
get_parity_upfront() (in module catlas.parity.parity_utils)
get_pourbaix_info() (in module catlas.filter_utils)
get_pourbaix_stability() (in module catlas.filter_utils)
get_result() (catlas.parity.data_processing_utils.ProcessValTraj method)
get_sankey_diagram() (catlas.sankey.sankey_utils.Sankey method)
get_specific_smile_plot() (in module catlas.parity.parity_utils)
get_surface_density() (in module catlas.filter_utils)
get_total_bb() (in module catlas.filter_utils)
get_total_nn() (in module catlas.filter_utils)
GraphsListDataset (class in catlas.adslab_predictions)
,
[1]
H
hash_func() (in module catlas.cache_utils)
K
kube_cluster_new_worker() (in module catlas.dask_kube_utils)
L
load_adsorbates_and_filter() (in module catlas.prediction_steps)
load_bulks_and_filter() (in module catlas.prediction_steps)
load_checkpoint() (catlas.adslab_predictions.BatchOCPPredictor method)
,
[1]
M
make_dataloader() (catlas.adslab_predictions.BatchOCPPredictor method)
,
[1]
make_parity_plots() (in module catlas.parity.parity_utils)
make_predictions() (in module catlas.prediction_steps)
make_subplot() (in module catlas.parity.parity_utils)
merge_surface_adsorbate_combo() (in module catlas.enumerate_slabs_adslabs)
module
catlas.adslab_predictions
catlas.cache_utils
catlas.config_validation
catlas.dask_kube_utils
catlas.dask_utils
catlas.enumerate_slabs_adslabs
catlas.filter_utils
catlas.filters
catlas.nuclearity
catlas.parity.parity_utils
catlas.prediction_steps
N
naive_func_identifier() (in module catlas.cache_utils)
P
parse_inputs() (in module catlas.prediction_steps)
pb_query_and_write() (in module catlas.filter_utils)
predictions_filter() (in module catlas.filters)
process_data() (catlas.parity.data_processing_utils.ProcessValNPZ method)
ProcessValNPZ (class in catlas.parity.data_processing_utils)
ProcessValTraj (class in catlas.parity.data_processing_utils)
R
relaxation_prediction() (catlas.adslab_predictions.BatchOCPPredictor method)
,
[1]
S
Sankey (class in catlas.sankey.sankey_utils)
slab_filter() (in module catlas.filters)
split_balance_df_partitions() (in module catlas.dask_utils)
sqlitedict_memoize() (in module catlas.cache_utils)
SqliteSingleThreadDict (class in catlas.cache_utils)
surface_area() (in module catlas.filter_utils)
T
to_pickles() (in module catlas.dask_utils)
token() (in module catlas.cache_utils)
U
update_dictionary() (catlas.sankey.sankey_utils.Sankey method)
update_info() (in module catlas.parity.parity_utils)
update_y_positions() (catlas.sankey.sankey_utils.Sankey method)
V
validate_element() (in module catlas.config_validation)
validate_folder_exists() (in module catlas.config_validation)
validate_path_exists() (in module catlas.config_validation)
W
write_pourbaix_info() (in module catlas.filter_utils)